Index

A

allelereadcounts_to_GL() (in module simGL.simGL) allelereadcounts_to_pileup() (in module simGL.simGL)

array_combinations() (in module simGL.simGL) array_combinations_with_replacement() (in module simGL.simGL)

D

depth_per_haplotype() (in module simGL.simGL)

G

get_Mmindex() (in module simGL.simGL) get_pGTxMm() (in module simGL.simGL)

GL_to_Mm() (in module simGL.simGL) GL_to_vcf() (in module simGL.simGL)

I

incorporate_monomorphic() (in module simGL.simGL)

independent_depth() (in module simGL.simGL)

L

linked_depth() (in module simGL.simGL)

M

module simGL simGL.simGL

N

normalize_GL() (in module simGL.simGL)

R

ref_alt_to_index() (in module simGL.simGL)

refalt_int_encoding() (in module simGL.simGL)

S

sim_allelereadcounts() (in module simGL.simGL) simGL module

simGL.simGL module sorted_unsorted_allele_combination_correspondance() (in module simGL.simGL) subset_GL() (in module simGL.simGL)